1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GCCACTTTCTGGATTTCATGGAGTTGTATCTGGTTTCTTGGTTGGCGTCAAGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAGgtttgatactcttatcctcttctaatttgtcacttatcagcgacaataggtttatgcaaatgccctaaattttttaccacttacatctcttcag
species | Glycine max |
transcript | GLYMA16G26110.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAG TGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACGEST: gi|16343838|gb|BI969433.1|BI969433
genomic: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAGgtttgatact ... atctcttcagTGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACG
EST: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAG TGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACGEST: gi|9439913|gb|BE440425.1|BE440425
genomic: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAGgtttgatact ... atctcttcagTGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACG
EST: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAG TGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACGEST: gi|208260441|gb|GE058567.1|GE058567
genomic: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAGgtttgatact ... atctcttcagTGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACG
EST: AGCAAGTTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAG TGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACGEST: gi|6501861|gb|AW203220.1|AW203220
genomic: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAGgtttgatact ... atctcttcagTGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACG
EST: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAG TGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACA
genomic: AGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAGgtttgatact ... atctcttcagTGGTTGCCATCTATCACTGTATTGCTTTCCATTGCTATTAGCTTCTGGACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCACTTTCTGGATTTCATGGAGTTGTATCTGGTTTCTTGGTTGGCGTCAAGCAAATTATACCAGATCAAGAGCTTCCTTTCATTAAGATAAAAACAAAGgtttgatactcttatcctcttctaatttgtcacttatcagcgacaataggtttatgcaaatgccctaaattttttaccacttacatctcttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT