1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTGACCTGAAGCCAGGAGCTGAAGTAACAATAACTGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGgtacattaatagaaaacgaatatggtatatgtgatggtcatgattgttgctctgatcttcaccattgatcattgaaattttcttcacag
species | Glycine max |
transcript | GLYMA16G23710.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATG TTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGEST: gi|16281497|gb|BI944518.1|BI944518
genomic: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGgtacattaat ... ttcttcacagTTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATG
EST: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATG TTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGEST: gi|120532662|gb|EH260795.1|EH260795
genomic: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGgtacattaat ... ttcttcacagTTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATG
EST: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATG TTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGEST: gi|17518600|gb|BM187642.1|BM187642
genomic: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGgtacattaat ... ttcttcacagTTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATG
EST: GCCACCATCATCATG TTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGEST: gi|192296690|gb|FG991258.1|FG991258
genomic: GCCACCATCATCATGgtacattaat ... ttcttcacagTTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATG
EST: TTGGGAAAGAAATGTTTATGCCAAAAGATCCTAATGCCACCATCATCATG TTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGEST: gi|209718137|gb|BW657796.1|BW657796
genomic: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGgtacattaat ... ttcttcacagTTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATG
EST: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATG TTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATG
genomic: TTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGgtacattaat ... ttcttcacagTTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGACCTGAAGCCAGGAGCTGAAGTAACAATAACTGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGgtacattaatagaaaacgaatatggtatatgtgatggtcatgattgttgctctgatcttcaccattgatcattgaaattttcttcacag
- - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - AAGAAA