1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACCATGGCATGGATACTAGATGAGTATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATAgtaagtaattgtttgtttcatttcaatggccattgaagtgaaatcaaatcatatgcttaatatatcattgcccttatgttttttcaaactag
species | Glycine max |
transcript | GLYMA16G04560.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATA GATCTTGGTGGATCTCTCGGTAGAGACGCGGCTACAGGACGAGGAGTCCTCEST: gi|192308765|gb|FG999790.1|FG999790
genomic: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATAgtaagtaatt ... ttcaaactagGATCTTGGTGGATCTCTCGGTAGAGACGCGGCTACAGGACGAGGAGTCCTC
EST: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATA GATCTTGGTGGATCTCTCGGTAGAGACGCGGCTACAGGACGAGGAGTCCTCEST: gi|12496130|gb|BG046909.1|BG046909
genomic: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATAgtaagtaatt ... ttcaaactagGATCTTGGTGGATCTCTCGGTAGAGACGCGGCTACAGGACGAGGAGTCCTC
EST: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATA GATCTTGGTGGATCTCTCGGTAGAGACGCGGCTACAGGACGAGGAGTCCTCEST: gi|26058522|gb|CA801436.1|CA801436
genomic: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATAgtaagtaatt ... ttcaaactagGATCTTGGTGGATCTCTCGGTAGAGACGCGGCTACAGGACGAGGAGTCCTC
EST: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATA GATCTTGGTGGATCTCTCGGTAGAGACGCGGTTACAGGACGAGGAGTCCTCEST: gi|208192091|gb|GD992389.1|GD992389
genomic: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATAgtaagtaatt ... ttcaaactagGATCTTGGTGGATCTCTCGGTAGAGACGCGGCTACAGGACGAGGAGTCCTC
EST: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATA GATCTTGGTGGATCTCTAGGTAGAGACGCGGCTACAGGACGGGGAGTCCTC
genomic: ATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATAgtaagtaatt ... ttcaaactagGATCTTGGTGGATCTCTCGGTAGAGACGCGGCTACAGGACGAGGAGTCCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCATGGCATGGATACTAGATGAGTATTCCAAATTCCACGGTTACTCTCCTGCAGTAGTGACTGGAAAACCTATAgtaagtaattgtttgtttcatttcaatggccattgaagtgaaatcaaatcatatgcttaatatatcattgcccttatgttttttcaaactag
- - - - - - - - - - - - - - - - - - - - - - - - CTGCAG