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ATTTGGGCAGCCTATCAAAGTTAATTGGGCATATGCGAGTGGTCAGAGAGAGGATACGTCAGgttagttcagatttctgagttaaaatgttaaataaattgatatttatgggccagtttgtttaaacttaaaaaaatcagtttagacaaacattaaaaaagc...
species | Glycine max |
transcript | GLYMA16G01230.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TATCAAAGTTAATTGGGCATATGCGAGTGGTCAGAGAGAGGATACGTCAG GTCATTACAACATTTTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTAEST: gi|26058275|gb|CA801189.1|CA801189
genomic: TATCAAAGTTAATTGGGCATATGCGAGTGGTCAGAGAGAGGATACGTCAGgttagttcag ... taatttgcagGTCATTACAACATTTTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTA
EST: AGAGAGAGGATACGTCAG GTCATTACAACATTTTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTAEST: gi|298165726|gb|HO008697.1|HO008697
genomic: AGAGAGAGGATACGTCAGgttagttcag ... taatttgcagGTCATTACAACATTTTTGTTGGCGATCTAAGTCCTGAGGTTACTGATGCTA
EST: TATCAAAGTTAATTGGGCATATGCGAGTGGTCAGAGAGAGGATACGTCAG GTCATTACAACATTTTTGTTGGCGATCT
genomic: TATCAAAGTTAATTGGGCATATGCGAGTGGTCAGAGAGAGGATACGTCAGgttagttcag ... taatttgcagGTCATTACAACATTTTTGTTGGCGATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTGGGCAGCCTATCAAAGTTAATTGGGCATATGCGAGTGGTCAGAGAGAGGATACGTCAGgttagttcagatttctgagttaaaatgttaaataaattgatatttatgggccagtttgtttaaacttaaaaaaatcagtttagacaaacattaaaaaagc
- - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - taaaaaaa