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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCCATGCACTGATATTGTGTGTCCTATGTATATGCGTGTTTGGGACATGGTGAAAATTTCCAATGATCCAACTGAAACACGTCCTCTGATACTGTGCGAgtatgatttgtagttttacatcaacaacataatatgacttctaccgttccctgattttacagtgatagataattatataatttttttttatttgtgatgtccaacccaaatggcag

Basic information

species Glycine max
transcript GLYMA15G37670.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G37670.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv13s0067g03000.t01 (Vitis vinifera), 5'ss of exon 10
CTCCATGCACTGATATTGTGTGTCCTATGTATATGCGTGTTTGGGACATGGTGAAAATTTCCAATGATCCAACTGAAACACGTCCTCTGATACTGTGCGAgtatgat----ttgtagttttacatcaacaacataatatgacttctaccgttccctgattttacagtgatagataattatataatttttttttatttgtgatgtccaacccaaatggcag
||||||  || |||||||| || || ||||||||||||||||||||||| || || ||| | || |||||||||||||  || ||| |||| || |||||||||| |    ||  ||||||  ||  |||| |   | ||   | ||||        ||  |   |  |  |  ||||   |    |   | || || | |         ||| || |||
CTCCATCAACAGATATTGTCTGCCCCATGTATATGCGTGTTTGGGACATTGTAAAGATTGCAAAAGATCCAACTGAAATGCGACCTTTGATTCTATGCGAgtatgttcctttttcagtttttgatttacaaaaatgt-tgtaatgtacccaaattcaatccttttgacaatgccaattgatttgcataaatatacttataaaaat--gttcaactgtcag