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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAAATAGCGGACCAAATACCAATGGTTGTCAGgtaactttccagtggtcacactcacttccttttcctttcccttttgtcagtggtaacgttaaattggtaatgcccttttcctattgatgaatgttctcttcttgcttgcag

Basic information

species Glycine max
transcript GLYMA15G37190.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G37190.1 (Glycine max), 5'ss of exon 5
lower sequence: PP1S232_73V6.1 (Physcomitrella patens), 5'ss of exon 4
GCAAATAGCGGACCAAATACCAATGGTTGTCAGgtaactttccagtggtcacactcacttccttttcctttcccttttgtcagtggtaacgttaaattggtaatgcccttttcctattgatgaatgttctcttcttgcttgcag
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GCTAATAGCGGACCAAATACAAATGGATGTCAGgta-ttcaactttgaac-tggttacttcttatagacaaaacttgggttatccggatcagtaa-tcctcaatactccatctttac------attttcccttcgaggcagg--