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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGGTTGGCAAATATGCCTGTAGAATTGGAAGGATATATCCGCCCTGGGTGTACGATCCTGACAGTTTTTATTGCAATGCCTAACATTATGTGGATAACTgtaagggttcaacttgatgttctttacattatgtggttcttgtgtcatggttaagtggtcttattaccagttacctgccacaatattggactaataaact...

Basic information

species Glycine max
transcript GLYMA15G10620.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G10620.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv05s0020g02160.t01 (Vitis vinifera), 5'ss of exon 5
ATGGTTGGCAAATATGCCTGTAGAATTGGAAGGATATATCCGCCCTGGGTGTACGATCCTGACAGTTTTTATTGCAATGCCTAACATTATGTGGATAACTgtaagggttcaacttgatgttctttacattatgtggttcttgtgtcatggttaagtggtcttattac-cagttacctgccacaatattggactaataaact-
 |||||||| |  |||||| | || ||||| || |||||||| ||||||||||  ||| | ||| |||||||||||||||| ||  ||||||||   |  ||| |  ||  |  || | |   |  || | | |||   |   || | | | | || || | | |||   ||||   |        | | | |   | ||  
GTGGTTGGCTAGCATGCCTATTGAGTTGGAGGGCTATATCCGTCCTGGGTGTATCATCTTAACAATTTTTATTGCAATGCCAAAGTTTATGTGGGACAAGgtatgt-ttagagatgctttatatagcactttttggggttacagtgaggttaatgttgt-tgactacattgttaatgggtgatgattggtatttgcatacaa