1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' |
GTATCCAAGGGAAAATGAGGGATTACCAGCTGGCTGGACTAAACTGGCTCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATGgtaggtgtttggtgggcttgcagttgtgtctaattgaattaactgcatgtaaatgcaagttgctttgtcatgtgtaatttgatagactgaggtgatttagttatcccactaataggggtaaggcttagatgttgataagttggtttagataagtaatgacaaatagatgtgatttgcag
species | Glycine max |
transcript | GLYMA15G10370.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATG GGGCTTGGTAAAACATTGCAAACTATATCCTTAATTAAGGTTATTTGCACGEST: gi|193653092|gb|FK596416.1|FK596416
genomic: TCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATGgtaggtgttt ... tgatttgcagGGGCTTGGTAAAACATTGCAAACTATATCCTTA-TTA-GGTTATTTGCACG
EST: TCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATG GGGCTTGGTAAAACATTGCAAACTATATCCTTATTAGGTTATTTGCACGAEST: gi|193329816|gb|FK294506.1|FK294506
genomic: TCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATGgtaggtgttt ... tgatttgcagGGGCTTGGTAAAACATTGCAAACTATATCCTTATTAGGTTATTTGCACGA
EST: GTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATG GGGCTTGGTAAAACATTGCAAACTATATCCTTATTAGGTTATTTGCACGAGEST: gi|193604991|gb|FK555073.1|FK555073
genomic: GTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATGgtaggtgttt ... tgatttgcagGGGCTTGGTAAAACATTGCAAACTATATCCTTATTAGGTTATTTGCACGAG
EST: TCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATG GGGCTTGGTAAAACATTGCAAACTATATCCTTATTAGGTTATTTGCACGAEST: gi|207712269|gb|GD693313.1|GD693313
genomic: TCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATGgtaggtgttt ... tgatttgcagGGGCTTGGTAAAACATTGCAAACTATATCCTTATTAGGTTATTTGCACGA
EST: TCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATG GGGCTTGGTAAAACNTTGCAAATTATATCCTTATTAGGTTATTTGCACGAG
genomic: TCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATGgtaggtgttt ... tgatttgcagGGGCTTGGTAAAACATTGCAAACTATATCCTTATTAGGTTATTTGCACGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATCCAAGGGAAAATGAGGGATTACCAGCTGGCTGGACTAAACTGGCTCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATGgtaggtgtttggtgggcttgcagttgtgtctaattgaattaactgcatgtaaatgcaagttgctttgtcatgtgtaatttgatagactgaggtgatttagttatcccactaataggggtaaggcttagatgttgataagttggtttagataagtaatgacaaatagatgtgatttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT