1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATAAGGTTCTTGGTGTTGATAGACTCCGTGTGGTTGATGGCTCAACATTTTCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAGgtatgtacatatatagaacataacactgagtaaacatctttggattaactttgttaccaacttactatatatagaagttagggcgccaaattactaataa...
species | Glycine max |
transcript | GLYMA15G02790.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAG GTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGAAAATTGGCTGGTATEST: gi|20813937|gb|BQ298415.1|BQ298415
genomic: TCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAGgtatgtacat ... tttttcacagGTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGAAAATTGGCTGGTAT
EST: TCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAG GTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGAAAATTGGCTGGTATEST: gi|51342999|gb|CO983732.1|CO983732
genomic: TCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAGgtatgtacat ... tttttcacagGTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGAAAATTGGCTGGTAT
EST: TCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAG GTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGAAAATTGGCTGGTAT
genomic: TCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAGgtatgtacat ... tttttcacagGTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGAAAATTGGCTGGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAAGGTTCTTGGTGTTGATAGACTCCGTGTGGTTGATGGCTCAACATTTTCTGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGCAGgtatgtacatatatagaacataacactgagtaaacatctttggattaactttgttaccaacttactatatatagaagttagggcgccaaattactaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT