1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGGGAAATTTTTTGAAGGAACTGCAGAACAGATGTATCAGTCACTTAATGTAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatctccatccatactgaaaaaaaaattctatgggagtgtcattgatgattgatcttataagtataaatgatgaatgggattaagccacaaaact...
species | Glycine max |
transcript | GLYMA14G36610.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|151407616|gb|EV277431.1|EV277431
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAACCAGACAATTTGEST: gi|27426743|gb|CA938263.1|CA938263
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGEST: gi|151406931|gb|EV276746.1|EV276746
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|58017863|gb|CX704605.1|CX704605
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|192331092|gb|FK020312.1|FK020312
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|254333893|gb|GR848811.1|GR848811
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|298171750|gb|HO021342.1|HO021342
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|209706271|gb|BW676286.1|BW676286
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|58020634|gb|CX707376.1|CX707376
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|58017298|gb|CX704040.1|CX704040
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|209706270|gb|BW676285.1|BW676285
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGEST: gi|254333892|gb|GR848810.1|GR848810
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACCATTTGEST: gi|208118431|gb|GD918282.1|GD918282
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|254345800|gb|GR859447.1|GR859447
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|208037472|gb|GD833539.1|GD833539
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTCGCTCTGACACTTGAGCCAGACAATTTGEST: gi|151411907|gb|EV281718.1|EV281718
genomic: TACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|208268931|gb|GE069800.1|GE069800
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: ACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTCGCTCTGACACTTGAGCCAGACAATTTGEST: gi|58021215|gb|CX707957.1|CX707957
genomic: ACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|254322038|gb|GR837452.1|GR837452
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|151402755|gb|EV272568.1|EV272568
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|151406677|gb|EV276492.1|EV276492
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|254334579|gb|GR844364.1|GR844364
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|254335322|gb|GR846819.1|GR846819
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: AACACTCGCTTCATTACCAAAGTCAACTCCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|254335321|gb|GR846818.1|GR846818
genomic: AACACTCGCTTCATTACCAAAGTCAACT-CGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTGEST: gi|254340015|gb|GR858140.1|GR858140
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
EST: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAG TACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
genomic: TAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatct ... tcttctccagTACTCAGTGAACAACTTGCAATTTGCTCTGACACTTGAGCCAGACAATTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGAAATTTTTTGAAGGAACTGCAGAACAGATGTATCAGTCACTTAATGTAACACTCGCTTCATTACCAAAGTCAACTCGAGTATACTGTGGCCATGAGgtaaaaatctccatccatactgaaaaaaaaattctatgggagtgtcattgatgattgatcttataagtataaatgatgaatgggattaagccacaaaact
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