1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttacaaattctgattctcttagcagtttgatctttagatttttagatgctgctgttgtcaatttcccatctgagtacttgtacaagccactggc...
species | Glycine max |
transcript | GLYMA14G24270.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAA-TGAAGTGAEST: gi|151405517|gb|EV275331.1|EV275331
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGA
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|6914510|gb|AW396040.1|AW396040
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGAGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAAGAAAGGATTTTGGAAGGGAAGEST: gi|208035018|gb|GD836888.1|GD836888
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTG-AAGGGAAG
EST: GGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|37995705|gb|CF807294.1|CF807294
genomic: GGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|192331116|gb|FK020336.1|FK020336
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|208155706|gb|GD958467.1|GD958467
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|9819697|gb|BE555210.1|BE555210
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|193653839|gb|FK595651.1|FK595651
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|151410578|gb|EV280393.1|EV280393
genomic: TGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|193441805|gb|FK407742.1|FK407742
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: GGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|193585701|gb|FK538525.1|FK538525
genomic: GGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: GGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|23726885|gb|BU761446.1|BU761446
genomic: GGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTCTTGAAGGGA-GGATGGATEST: gi|17519828|gb|BM188870.1|BM188870
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATT-TTGAAGGGAAGGATGGAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATEST: gi|26059647|gb|CA802561.1|CA802561
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATEST: gi|207811930|gb|GD783515.1|GD783515
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGAT
EST: GAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|7233908|gb|AW569250.1|AW569250
genomic: GAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATEST: gi|7926292|gb|AW832318.1|AW832318
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAAT
EST: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGT CACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGAT
genomic: TCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttac ... tcttctgcagCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTgtaagcttacaaattctgattctcttagcagtttgatctttagatttttagatgctgctgttgtcaatttcccatctgagtacttgtacaagccactggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA