1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CAATATGGCAGAAACCTTCTGAAAATAGCTGCTATCTAAACCGTGAGGCAAGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTGgtattgtgttctggccttcctgatctacagatgattatatgattaatgccatgacagattgaacatatgtaaaatttccatactatcatcatcttatgcg...
species | Glycine max |
transcript | GLYMA14G07190.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTG GTATGTTAATCTAAAACCATGCATCTCTCAATTGCCTGAGAATGGATATGGEST: gi|10238002|gb|BE806890.1|BE806890
genomic: AGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTGgtattgtgtt ... attaatttagGTATGTTAATCTAAAACCATGCATCTCTCAATTGCCTGAGAATGGATATGG
EST: AGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTG GTATGTTAATCTAAAACCATGCATCTCTCAATTGCCTGAGAATGGATATGGEST: gi|27446192|gb|CA953315.1|CA953315
genomic: AGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTGgtattgtgtt ... attaatttagGTATGTTAATCTAAAACCATGCATCTCTCAATTGCCTGAGAATGGATATGG
EST: AGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTG GTATGTTAATCTAAAACCATGCATCTCTCAATTGCCTGAGAATGGATATGGEST: gi|10238010|gb|BE806898.1|BE806898
genomic: AGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTGgtattgtgtt ... attaatttagGTATGTTAATCTAAAACCATGCATCTCTCAATTGCCTGAGAATGGATATGG
EST: AGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTG GTATGTTAATCTAAAACCATGCATCTCTCAATTGCCTGAGAATGGATATGG
genomic: AGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTGgtattgtgtt ... attaatttagGTATGTTAATCTAAAACCATGCATCTCTCAATTGCCTGAGAATGGATATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATATGGCAGAAACCTTCTGAAAATAGCTGCTATCTAAACCGTGAGGCAAGAACTCAACCACCACTGTGTGACCAAAGTGATGACCCCGACAATGTTTGgtattgtgttctggccttcctgatctacagatgattatatgattaatgccatgacagattgaacatatgtaaaatttccatactatcatcatcttatgcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttcct