1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACTATTGGTCAAGCATATGAAGATATGCAGACACAGAACCAAAATCTGTTGAACCAGGTGATCGAGAGGGATGACTATAATATTAAGgtatgtcttacttttatctttactaaacactgccttgttattatcttcaccatctttccgtgcactacagtaatgcttaggttattttcctggcttttgc...
species | Glycine max |
transcript | GLYMA14G05490.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACCAGGTGATCGAGAGGGATGACTATAATATTAAG CTTGTATCAGATAGTGTGAAGACAAAACAGGCGCACAACACTTTAATGTCCEST: gi|6951761|gb|AW423829.1|AW423829
genomic: ACCAGGTGATCGAGAGGGATGACTATAATATTAAGgtatgtctta ... cttaatgcagCTTGTATCAGATAGTGTGAAGACAAAACAGGCGCACAACACTTTAATGTCC
EST: ACCAAAATCTGTTGAACCAGGTGATCGAGAGGGATGACTATAATATTAAG CTTGTATCAGATAGTGTGAAGACAAAACAGGCGCACAACACTTTAATGTCCEST: gi|19269212|gb|BM885468.1|BM885468
genomic: ACCAAAATCTGTTGAACCAGGTGATCGAGAGGGATGACTATAATATTAAGgtatgtctta ... cttaatgcagCTTGTATCAGATAGTGTGAAGACAAAACAGGCGCACAACACTTTAATGTCC
EST: ACCAAAATCTGTTGAACCAGGTGATCGAGAGGGATGACTATAATATTAAG CTTGTATCAGATAGTGTGAAGACAAAACAGGCGCACAACACTTTAATGTCC
genomic: ACCAAAATCTGTTGAACCAGGTGATCGAGAGGGATGACTATAATATTAAGgtatgtctta ... cttaatgcagCTTGTATCAGATAGTGTGAAGACAAAACAGGCGCACAACACTTTAATGTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTATTGGTCAAGCATATGAAGATATGCAGACACAGAACCAAAATCTGTTGAACCAGGTGATCGAGAGGGATGACTATAATATTAAGgtatgtcttacttttatctttactaaacactgccttgttattatcttcaccatctttccgtgcactacagtaatgcttaggttattttcctggcttttgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG