1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
AGAAAGTGGTGCCTTTTCATGGGAAATTGCTCCAGTTGAAGTCTCTGGTGGAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAGgtaaccatataaataacttgaaccatggtaatacttgttcttgtataaatatggtgagcctacgaaaacacatgtttacccaataattcatgagtcttca...
species | Glycine max |
transcript | GLYMA14G00760.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAG TTTGATGCTGCCAAGTTACGCAAACTEST: gi|192328380|gb|FK020091.1|FK020091
genomic: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAGgtaaccatat ... cctatgccagTTTGATGCTGCCAAGTTACGCAAACT
EST: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAG TTTGATGCTGCCAAGTTACGCAAACTTCGGCCAAGTTTCAAGGAGACTGGAEST: gi|209708680|gb|BW678861.1|BW678861
genomic: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAGgtaaccatat ... cctatgccagTTTGATGCTGCCAAGTTACGCAAACTTCGGCCAAGTTTCAAGGAGACTGGA
EST: GAAGGGGAAGACCATCAACAGTTGTTGATAAGGACGAAGGCCTAGGAAAG TTTGATGCTGCCAAGTTACGCAAACTTCGGCCAAGTTTCAAGGAGACTGGAEST: gi|192329988|gb|FK021574.1|FK021574
genomic: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAGgtaaccatat ... cctatgccagTTTGATGCTGCCAAGTTACGCAAACTTCGGCCAAGTTTCAAGGAGACTGGA
EST: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAG TTTGATGCTGCCAAGTTACGCAAACTTCGGCCAAGTTTEST: gi|37994372|gb|CF806118.1|CF806118
genomic: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAGgtaaccatat ... cctatgccagTTTGATGCTGCCAAGTTACGCAAACTTCGGCCAAGTTT
EST: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAG TTTGATGCTGCCAAGTTACGCAAACTTCGGCCAAGTTTCAAGGAGACTGGA
genomic: GAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAGgtaaccatat ... cctatgccagTTTGATGCTGCCAAGTTACGCAAACTTCGGCCAAGTTTCAAGGAGACTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAAAGTGGTGCCTTTTCATGGGAAATTGCTCCAGTTGAAGTCTCTGGTGGAAGAGGAAGACCATCAACAGTTGTTGATAAGGATGAAGGCCTAGGAAAGgtaaccatataaataacttgaaccatggtaatacttgttcttgtataaatatggtgagcctacgaaaacacatgtttacccaataattcatgagtcttca
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG