1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
AACTGATCAGCCTGAAGTTATGGTCAACTTTGTGACCTCTTCCTACAAGCCAGAGCTGTTGAAGTTCCTAGTTGATAAAGTTTCCGTATTTCCTGAAGTGgttggtacttaagttttttaattacttttttttcttataaatgtgcttcttccttaactttccaaactgtatgcacatattgattttaataccattgaagtttcttctttgcatgaatgatag
species | Glycine max |
transcript | GLYMA13G42890.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAGAGCTGTTGAAGTTCCTAGTTGATAAAGTTTCCGTATTTCCTGAAGTG GGTAAGTGTCATTAATAATGTAAATACTTCTGTTGGCAACACATCTGTTGGEST: gi|18040955|gb|BM309249.1|BM309249
genomic: CAGAGCTGTTGAAGTTCCTAGTTGATAAAGTTTCCGTATTTCCTGAAGTGgttggtactt ... tgaatgatagG-TAAGTGTCATTAATAATGTAAATACTTCTGTTGGCAACACATCTGTTGG
EST: CAGAGCTGTTGAAGTTCCTAGTTGATAAAGTTTCCGTATTTCCTGAAGTG GTAAGTGTCATTAATAATGTAAATACTTCTGTTGGCAACACATCTGTTGGG
genomic: CAGAGCTGTTGAAGTTCCTAGTTGATAAAGTTTCCGTATTTCCTGAAGTGgttggtactt ... tgaatgatagGTAAGTGTCATTAATAATGTAAATACTTCTGTTGGCAACACATCTGTTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACTGATCAGCCTGAAGTTATGGTCAACTTTGTGACCTCTTCCTACAAGCCAGAGCTGTTGAAGTTCCTAGTTGATAAAGTTTCCGTATTTCCTGAAGTGgttggtacttaagttttttaattacttttttttcttataaatgtgcttcttccttaactttccaaactgtatgcacatattgattttaataccattgaagtttcttctttgcatgaatgatag
- - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG