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GCCATATCTTGCAAATGGAGGATCTCCAGATAGATACAATTATATAAGCAATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGgtagttgtatccaacccttccacttgcaattcttttactgtttctattcatgaaggattaaatattctatgatatgacttttactataaacaattgagaa...
species | Glycine max |
transcript | GLYMA13G42800.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGG TEST: gi|7686354|gb|AW757002.1|AW757002
genomic: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCAT-Ggtagttgtat ... aaatatgtag-
EST: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGG TEST: gi|7686354|gb|AW757002.1|AW757002
genomic: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCAT-Ggtagttgtat ... aaatatgtag-
EST: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGG TEST: gi|19936402|gb|BQ080848.1|BQ080848
genomic: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCAT-Ggtagttgtat ... aaatatgtag-
EST: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATG GTAAGTAGCCATGAAACCAGCTTAGTTGCCCGATGCCGTAGAGTGTATGCGEST: gi|21887329|gb|BQ740542.1|BQ740542
genomic: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGgtagttgtat ... aaatatgtagGTAAGTAGCCATGAAACCAGCTTAGTTGCCCGATGCCGTAGAGTGTATGCG
EST: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGG TEST: gi|21887329|gb|BQ740542.1|BQ740542
genomic: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCAT-Ggtagttgtat ... aaatatgtag-
EST: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGG TEST: gi|21887329|gb|BQ740542.1|BQ740542
genomic: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCAT-Ggtagttgtat ... aaatatgtag-
EST: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGG TEST: gi|208327646|gb|GE119368.1|GE119368
genomic: ATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCAT-Ggtagttgtat ... aaatatgtag-
EST: ACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATG GTAAGTAGCCATGAAACCAGCTTAGTTGCCCGATGCCGTAGAGTGTATGCG
genomic: ACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGgtagttgtat ... aaatatgtagGTAAGTAGCCATGAAACCAGCTTAGTTGCCCGATGCCGTAGAGTGTATGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCATATCTTGCAAATGGAGGATCTCCAGATAGATACAATTATATAAGCAATGACTTTTCATTTCCACCAGGAGGCATACCATCACTAAGATTACCCATGgtagttgtatccaacccttccacttgcaattcttttactgtttctattcatgaaggattaaatattctatgatatgacttttactataaacaattgagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccaaccc