1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AAAAATGGGGATGAAGGAGGCAAGGATATTATGAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAGgtatgattgtctgggtactttcaaacctaacatttttcttacaatgtggttctttttggaccaaaagattatgaacatattagagaactatgaatattaa...
species | Glycine max |
transcript | GLYMA13G41580.5 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGTCGTAG GCATAAGTTTGCACAATTTTCCAGAAGGAATGGCGGTGTTCCTTGGATCCTEST: gi|298174471|gb|HO014616.1|HO014616
genomic: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAGgtatgattgt ... catttcttagGCATAAGTTTGCACAATTTTCCAGAAGGAATGGCGGTGTTCCTTGGATCCT
EST: GAAAAAGCATCGCCGGCGAGTTTTGTTCAGTGGAATTGTTACAGCCGTAG GCATAAGTTTGCACAATTTTCCAGAAGGEST: gi|213617692|gb|DB967222.1|DB967222
genomic: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAGgtatgattgt ... catttcttagGCATAAGTTTGCACAATTTTCCAGAAGG
EST: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAG CCATAAGTTTGCACAATTTTCCAGAAGGAATGGEST: gi|298198295|gb|HO039834.1|HO039834
genomic: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAGgtatgattgt ... catttcttagGCATAAGTTTGCACAATTTTCCAGAAGGAATGG
EST: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAG GCATAAGTTTGCACAATTTTCCAGAAGGAATGEST: gi|192323380|gb|FK017081.1|FK017081
genomic: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAGgtatgattgt ... catttcttagGCATAAGTTTGCACAATTTTCCAGAAGGAATG
EST: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAG GCATAAGTTTGCACAATTTTCCAGAAGGAATGGCGGTGTTCCTTGGATCCT
genomic: GAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAGgtatgattgt ... catttcttagGCATAAGTTTGCACAATTTTCCAGAAGGAATGGCGGTGTTCCTTGGATCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAAATGGGGATGAAGGAGGCAAGGATATTATGAAAAAGCATCGCCGGCAAGTTTTGTTCAGTGGAATTGTTACAGCCGTAGgtatgattgtctgggtactttcaaacctaacatttttcttacaatgtggttctttttggaccaaaagattatgaacatattagagaactatgaatattaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA