1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GATGAATCTATTCGGTTATGGAATGCTCATACTGGAATATGCATTTTGATATTTGCTGGAGGCGGGGGACATCGTAATGAAGTCTTAAGTGTTgtaagtgtattcttcatttaatatatctctcattttttcttgcttaattacctattctcgatgataatataagatttggattttggagattagtcaaactaactttttgttgcttgttgtag
species | Glycine max |
transcript | GLYMA13G36310.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTTTGATATTTGCTGGAGGCGGGGGACATCGTAATGAAGTCTTAAGTGTT GATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGTEST: gi|193390683|gb|FK355931.1|FK355931
genomic: TTTTGATATTTGCTGGAGGCGGGGGACATCGTAATGAAGTCTTAAGTGTTgtaagtgtat ... cttgttgtagGATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGT
EST: GGCGGGGGACATCGTAATGAAGTCTTAAGTGTT GATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGTEST: gi|208097986|gb|GD895513.1|GD895513
genomic: GGCGGGGGACATCGTAATGAAGTCTTAAGTGTTgtaagtgtat ... cttgttgtagGATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGT
EST: GGCGGGGGACATCGTAATGAAGTCTTAAGTGTT GATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGTEST: gi|193588367|gb|FK544074.1|FK544074
genomic: GGCGGGGGACATCGTAATGAAGTCTTAAGTGTTgtaagtgtat ... cttgttgtagGATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGT
EST: AAGTCTTAAGTGTT GATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGTEST: gi|207751088|gb|GD725307.1|GD725307
genomic: AAGTCTTAAGTGTTgtaagtgtat ... cttgttgtagGATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGT
EST: GGCGGGGGACATCGTAATGAAGTCTTAAGTGTT GATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGTEST: gi|193586867|gb|FK540797.1|FK540797
genomic: GGCGGGGGACATCGTAATGAAGTCTTAAGTGTTgtaagtgtat ... cttgttgtagGATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGT
EST: GGCGGGGGACATCGTAATGAAGTCTTAAGTGTT GATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGT
genomic: GGCGGGGGACATCGTAATGAAGTCTTAAGTGTTgtaagtgtat ... cttgttgtagGATTTTCATCCATCGGATATGTATCGTATTTGTAGTTGTGGCATGGATAGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGAATCTATTCGGTTATGGAATGCTCATACTGGAATATGCATTTTGATATTTGCTGGAGGCGGGGGACATCGTAATGAAGTCTTAAGTGTTgtaagtgtattcttcatttaatatatctctcattttttcttgcttaattacctattctcgatgataatataagatttggattttggagattagtcaaactaactttttgttgcttgttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG