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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTGATAAAGACCCTGCGAGCAATAAATGGCACCTCTTGGCATGACACATTTTTAGGCCTTTGGTTGGCAACTCTTCGTCTTGTTCAAAGGgtataactctttctctgcaactcaatctgttttcctgtgaagttgtggttttaaatttatcttgtcatcgattgcttctggtattccattaccttacactttgtaattaaagaatttgcataagtggtttacttctccaatttacttgttgatttgtttatag

Basic information

species Glycine max
transcript GLYMA13G28070.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA13G28070.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv05s0020g02570.t01 (Vitis vinifera), 5'ss of exon 5
GTTTGATAAAGACCCTGCGAGCAATAAATGGCACCTCTTGGCATGACACATTTTTAGGCCTTTGGTTGGCAACTCTTCGTCTTGTTCAAAGGgt-ataactcttt----ctctgcaactcaatctgttttcctgtgaagttgtggttttaaatttatcttgtcatcgattgcttctggtattccattaccttacactttgtaattaaagaatttgcataagtggtttacttctccaatttacttgttgatttgtttatag
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GTTTGATAAAGGTTCTTCAAGCAATTAATGGCACCACCTGGCATGACACCTTTTTGGGTCTTTGGATTGCAGCTCTTCGTCTTGTTCAAAGGgtcaggactgattaaagctgaaccgatgactttatttttccatgaa-tagtgatac-aaatttatgttaaattttcatgatgataaaattatgttgcttcct------------------------------------------------------------------