1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TAGACATCCAAGGCCATTGACCACTGTTGGCTGGCAGAGCAATGATAGACATGGAAGGTCAAGAATACCTAGTGATAGATATCGATCATTGGCTGATGAGgttggtctcaatgaacgatttaactctgaggtatctataagtatcttaagtctcgagctctgttcttgtgagtaatgattggaaacacttgtgttcatgt...
species | Glycine max |
transcript | GLYMA13G20210.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATGGAAGGTCAAGAATACCTAGTGATAGATATCGATCATTGGCTGATGAG GGTTTCATGATTGTTGATCGCACTTCACTGAATGGATCTAGGAATATGCTTEST: gi|254347039|gb|GR856709.1|GR856709
genomic: ATGGAAGGTCAAGAATACCTAGTGATAGATATCGATCATTGGCTGATGAGgttggtctca ... gttctttcagGGTTTCATGATTGTTGATCGCACTTCACTGAATGGATCTAGGAATATGCTT
EST: ATGGAAGGTCAAGAATACCTAGTGATAGATATCGATCATTGGCTGATGAG GGTTTCATGATTGTTGATCGCACTTCACTGAATGGATCTAGGAATATGCTTEST: gi|17963382|gb|BM270132.1|BM270132
genomic: ATGGAAGGTCAAGAATACCTAGTGATAGATATCGATCATTGGCTGATGAGgttggtctca ... gttctttcagGGTTTCATGATTGTTGATCGCACTTCACTGAATGGATCTAGGAATATGCTT
EST: ATGGAAGGTCAAGAATACCTAGTGATAGATATCGATCATTGGCTGATGAG GGTTTCATGATTGTTGATCGCACTTCACTGAATGGATCTAGGAATATGCTT
genomic: ATGGAAGGTCAAGAATACCTAGTGATAGATATCGATCATTGGCTGATGAGgttggtctca ... gttctttcagGGTTTCATGATTGTTGATCGCACTTCACTGAATGGATCTAGGAATATGCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGACATCCAAGGCCATTGACCACTGTTGGCTGGCAGAGCAATGATAGACATGGAAGGTCAAGAATACCTAGTGATAGATATCGATCATTGGCTGATGAGgttggtctcaatgaacgatttaactctgaggtatctataagtatcttaagtctcgagctctgttcttgtgagtaatgattggaaacacttgtgttcatgt
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT