1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCTATTCGTAAACAACCATTGACTGTATATGGTGATGGGAAGCAAACAAGAAGTTTCCAATATGTCTCTGATTTGgtatatagctaatatgtcattattattattattattattattattgttgttgttgttgttttgaaaccttatatttcactgaatccctcctccattacta...
species | Glycine max |
transcript | GLYMA13G19640.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TATATGGTGATGGGAAGCAAACAAGAAGTTTCCAATATGTCTCTGATTTG GTTAATGGGCTGGTGGCTTTGATGGAAAGCGAACATGTGGGACCTTTCAACEST: gi|19270518|gb|BM886774.1|BM886774
genomic: TATATGGTGATGGGAAGCAAACAAGAAGTTTCCAATATGTCTCTGATTTGgtatatagct ... caattcacagGTTAATGGGCTGGTGGCTTTGATGGAAAGCGAACATGTGGGACCTTTCAAC
EST: TATATGGTGATGGGAAGCAAACAAGAAGTTTCCAATATGTCTCTGATTTG GTTAATGGGCTGGTGGCTTTGATGGAAAGCGAACATGTGGGACCTTTCAAC
genomic: TATATGGTGATGGGAAGCAAACAAGAAGTTTCCAATATGTCTCTGATTTGgtatatagct ... caattcacagGTTAATGGGCTGGTGGCTTTGATGGAAAGCGAACATGTGGGACCTTTCAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTATTCGTAAACAACCATTGACTGTATATGGTGATGGGAAGCAAACAAGAAGTTTCCAATATGTCTCTGATTTGgtatatagctaatatgtcattattattattattattattattattgttgttgttgttgttttgaaaccttatatttcactgaatccctcctccattacta
- - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcctcc