1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTCGACCTTTTCGGGAGAAGATGCACATGTTTTGAGTGAAGCCAAGGAGGAGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAGgtaccttgtttaattctaattacgaatttatgatatttgaaaaactgaactgtatgatctttcagcttcagcttcgtacattgttcagttactgttgccg...
species | Glycine max |
transcript | GLYMA13G06410.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAG TGTGATTTGCTTGACTTGCCTGCTGTTGGGCAACTGGAGAAGGATGCCAAAEST: gi|10843324|gb|BF066627.1|BF066627
genomic: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAGgtaccttgtt ... catgttgtagTGTGATTTGCTTGACTTGCCTGCTGTTGGGCAACTGGAGAAGGATGCCAAA
EST: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAG TGTGATTTGCTTGACTTGCCTGCTGTTGGGCAACTGGAGAAGGATGCCAAAEST: gi|16996731|gb|BM086103.1|BM086103
genomic: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAGgtaccttgtt ... catgttgtagTGTGATTTGCTTGACTTGCCTGCTGTTGGGCAACTGGAGAAGGATGCCAAA
EST: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAG TGTGATTTGCTTGACTTGCCTGCTGTTGGGCAACTGGAGAAGGATGCCAAAEST: gi|120533886|gb|EH262019.1|EH262019
genomic: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAGgtaccttgtt ... catgttgtagTGTGATTTGCTTGACTTGCCTGCTGTTGGGCAACTGGAGAAGGATGCCAAA
EST: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAG TGTGATTTGCTTGACTTGCCTGCTGTTGGGCAACTGGAGAAGGATGCCAAAEST: gi|16347357|gb|BI972952.1|BI972952
genomic: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAGgtaccttgtt ... catgttgtagTGTGATTTGCTTGACTTGCCTGCTGTTGGGCAACTGGAGAAGGATGCCAAA
EST: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAG TGTGATTTGCTTGACTTG
genomic: AGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAGgtaccttgtt ... catgttgtagTGTGATTTGCTTGACTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCGACCTTTTCGGGAGAAGATGCACATGTTTTGAGTGAAGCCAAGGAGGAGGCCGCACGTGCAATTGTGGAATTTGTCAGAGCTCCTGACATATATCAGgtaccttgtttaattctaattacgaatttatgatatttgaaaaactgaactgtatgatctttcagcttcagcttcgtacattgttcagttactgttgccg
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