1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATGGAAGAAGAAGATTGGGTAGTGGGATAGGTGTTCAGGGAAATGTGGACCCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAGgttggtgacataatatctctgtgcctcagtattcatgaagtcattccatatggtttttggcttatagaactagacaaccattacttgtcctgttgtccat...
species | Glycine max |
transcript | GLYMA12G35880.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAAAG GGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGGEST: gi|214005404|gb|DB988952.1|DB988952
genomic: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAGgttggtgaca ... tatttgtcagGGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGG
EST: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAG GGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGGEST: gi|58020439|gb|CX707181.1|CX707181
genomic: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAGgttggtgaca ... tatttgtcagGGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGG
EST: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAG GGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGGEST: gi|9259923|gb|BE348070.1|BE348070
genomic: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAGgttggtgaca ... tatttgtcagGGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGG
EST: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAG GGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGGEST: gi|22932793|gb|BU549932.1|BU549932
genomic: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAGgttggtgaca ... tatttgtcagGGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGG
EST: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAG GGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGG
genomic: CCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAGgttggtgaca ... tatttgtcagGGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGAAGAAGAAGATTGGGTAGTGGGATAGGTGTTCAGGGAAATGTGGACCCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAGgttggtgacataatatctctgtgcctcagtattcatgaagtcattccatatggtttttggcttatagaactagacaaccattacttgtcctgttgtccat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA