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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTACGAGGAAAAGTTCTATTTTAATCCAGGTGACACTGGATTTAAGgtaggtgcttaagatagccataattgatattcactggttggaataaccttggttttatgggttttttttaatgattggtgaacatagtgtaacattgaggcttttgctgaacag

Basic information

species Glycine max
transcript GLYMA12G31100.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18040291|gb|BM308585.1|BM308585
EST:     GTTACGAGGAAAAGTTCTATTTTAATCCAGGTGACACTGGATTTAAG                         GTTTTCCAGACTAAATTTGCAAAGATTGGAGTTG
genomic: GTTACGAGGAAAAGTTCTATTTTAATCCAGGTGACACTGGATTTAAGgtaggtgctt ... tgctgaacagGTTTTCCAGACTAAATTTGCAAAGATTGGAGTTG
EST: gi|58025178|gb|CX711919.1|CX711919
EST:     GTTACGAGGAAAAGTTCTATTTTAATTCAGGTGACACTGGATTAAAG                         GTTTTCCAGACTAAATTTGCAAAGATTGGAGTTG
genomic: GTTACGAGGAAAAGTTCTATTTTAATCCAGGTGACACTGGATTTAAGgtaggtgctt ... tgctgaacagGTTTTCCAGACTAAATTTGCAAAGATTGGAGTTG