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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTGAGCTGCTCTTGGTAGTAGAGAAGCTTCAAGAGTTACGCTCCATAAGAATACAAAAGTTGAAAAAACAAGgtatatataagaagatcactctgcttctagttaactgtcttacgattatagtgcataaataacttggtctcttattggtttgcttggtttctttttctcc...

Basic information

species Glycine max
transcript GLYMA12G05400.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G05400.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv15s0046g01740.t01 (Vitis vinifera), 5'ss of exon 6
ATTGAGCTGCTCTTGGTAGTAGAGAAGCTTCAAGAGTTACGCTCCATAAGAATACAAAAGTTGAAAAAACAAGgtatatataagaagatcactctgcttctagttaactgt--cttacgattatagtgcataaataacttggtctcttattggtttgcttggtttctttttctcc
 ||||| || | ||  | || || ||||| ||||||||||||||||| ||||| ||||| |||||||||||||||     |           |  |    | ||||| | |  ||  |   | |  ||   |  | | |||||      ||  ||                    
CTTGAGATGGTTTTAATTGTGGATAAGCTGCAAGAGTTACGCTCCATCAGAATCCAAAAATTGAAAAAACAAGgtgagcctttttgagatctttggtcattggttaaatatatctgccacattttctgttcagttgatttggttctcccttctttcatcatacaataacaaga--