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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCCTGAATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGACATATCACGCATgtatgacattaaatactgctgctgattttgtttgtttgactatgtgatgctttgctaataagaaactataatttccag

Basic information

species Glycine max
transcript GLYMA12G03060.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|17963692|gb|BM270438.1|BM270438
EST:     AATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGACATATCACGCAT                         ATTACCAGATGGCTCGATGATGGAGATTACCAAAGTTTATCCATTGGATGC
genomic: AATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGACATATCACGCATgtatgacatt ... taatttccagATTACCAGATGGCTCGATGATGGAGATTACCAAAGTTTATCCATTGGATGC
EST: gi|9899237|gb|BE608135.1|BE608135
EST:     AATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGACATATCACGCAT                         ATTACCAGATGGCTCGATGATGGAGATTACGAAAGTTTATCCATTGGATGC
genomic: AATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGACATATCACGCATgtatgacatt ... taatttccagATTACCAGATGGCTCGATGATGGAGATTACCAAAGTTTATCCATTGGATGC
EST: gi|7692015|gb|AW760131.1|AW760131
EST:     AATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGACATATCACGCAT                         ATTACCAGATGGCTCGATGATGGAGATTACCAAAGTTTATCCATTGGATGC
genomic: AATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGACATATCACGCATgtatgacatt ... taatttccagATTACCAGATGGCTCGATGATGGAGATTACCAAAGTTTATCCATTGGATGC