1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATCAAGTCAGAAGATTGGTCTCGCTTTGTTGCTCCCTTTTGGCCCGCAGTGATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTGgtaagctcaaactacatctcctatctctagtcctgtactgtttttaacaattacttccatacacaataacttttatgtagctaattaagaacatgactaa...
species | Glycine max |
transcript | GLYMA12G01680.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTG GACTTAAAGCCATEST: gi|58023365|gb|CX710106.1|CX710106
genomic: GATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTGgtaagctcaa ... tttggtccagGACTTAAAGCCAT
EST: GATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTG GACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCATTGATGATAAAAGGATEST: gi|57575258|gb|CX548233.1|CX548233
genomic: GATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTGgtaagctcaa ... tttggtccagGACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCATTGATGATAAAAGGAT
EST: GATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTG GACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCATTGATGATAAAAGGATEST: gi|193380261|gb|FK348695.1|FK348695
genomic: GATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTGgtaagctcaa ... tttggtccagGACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCATTGATGATAAAAGGAT
EST: ATACGCTCCGCGTTGACATAGGAATGGCCTCACTTCACTCTTGCGCAGTG GACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCAEST: gi|208325898|gb|GE124550.1|GE124550
genomic: ATACGCTCCGCGTTGACAT-GGAATGGCCTCACTTCACTCTTGCGCAGTGgtaagctcaa ... tttggtccagGACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCA
EST: GATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTG GACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCATTGATGATAAAAGGAT
genomic: GATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTGgtaagctcaa ... tttggtccagGACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCATTGATGATAAAAGGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAAGTCAGAAGATTGGTCTCGCTTTGTTGCTCCCTTTTGGCCCGCAGTGATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTGgtaagctcaaactacatctcctatctctagtcctgtactgtttttaacaattacttccatacacaataacttttatgtagctaattaagaacatgactaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA