1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATCACTTGGACCAAAGCTATACCATTTAGAGATTGCTTTGGGGCATTATAAGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaagatgagcctaaccattcaacatcatatcatttttcctgtactttaaggaacttttcaaatctagaattgtgtgcaggaggctactttagt...
species | Glycine max |
transcript | GLYMA11G33700.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|31470635|gb|CD412663.1|CD412663
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|151403447|gb|EV273257.1|EV273257
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAA GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAG-ATEST: gi|192299879|gb|FG990087.1|FG990087
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAA GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|120534693|gb|EH262826.1|EH262826
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|208193623|gb|GD992970.1|GD992970
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: ATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|120534677|gb|EH262810.1|EH262810
genomic: ATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTTTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCCCAGGATEST: gi|209722400|gb|BW665860.1|BW665860
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|209708273|gb|BW678645.1|BW678645
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|20813171|gb|BQ297649.1|BQ297649
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|5677088|gb|AI938218.1|AI938218
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATEST: gi|209705735|gb|BW661403.1|BW661403
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
EST: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAG GTCATTTTCTCGAGGGGATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
genomic: AGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaa ... aaccgtacagGTCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCACTTGGACCAAAGCTATACCATTTAGAGATTGCTTTGGGGCATTATAAGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGgtatgttcaagatgagcctaaccattcaacatcatatcatttttcctgtactttaaggaacttttcaaatctagaattgtgtgcaggaggctactttagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG