1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTTTGCACAGCCAAGATGAACTTGAGTGATGAGGTAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAGgtttgttatttatatcttgtcctatgatttttgtgccaataagtttatataggaaataggaatgcttgttattagtttcaagatcatttatataactatt...
species | Glycine max |
transcript | GLYMA11G31450.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAG ATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGAEST: gi|193392644|gb|FK358803.1|FK358803
genomic: TAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAGgtttgttatt ... gtgcctgcagATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGA
EST: TAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAG ATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGAEST: gi|23729416|gb|BU762793.1|BU762793
genomic: TAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAGgtttgttatt ... gtgcctgcagATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGA
EST: TAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAG ATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGAEST: gi|254337558|gb|GR845235.1|GR845235
genomic: TAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAGgtttgttatt ... gtgcctgcagATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGA
EST: GGATTATGTTTCTCGT-CCGACAAAATCAGTGCTGCTGAG ATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGAEST: gi|48575128|gb|CO036248.1|CO036248
genomic: GGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAGgtttgttatt ... gtgcctgcagATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGA
EST: TAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAG ATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGAEST: gi|193380087|gb|FK346393.1|FK346393
genomic: TAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAGgtttgttatt ... gtgcctgcagATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAGA
EST: GACCTGGAGGATTATGTTTTCTCGTCCCGACAAAATCAGTGTCTGCTGAG ATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAG
genomic: GACCTGGAGGATTATG-TTTCTCGTCCCGACAAAATCAGTG-CTGCTGAGgtttgttatt ... gtgcctgcagATATCAGCTATTTGTCAAGAAGCTGGAATGCATGCTGTTCGCAAGAATAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGCACAGCCAAGATGAACTTGAGTGATGAGGTAGACCTGGAGGATTATGTTTCTCGTCCCGACAAAATCAGTGCTGCTGAGgtttgttatttatatcttgtcctatgatttttgtgccaataagtttatataggaaataggaatgcttgttattagtttcaagatcatttatataactatt
- - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT