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GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAGgtttgtaattatctccctgccctttcccataccatcttgttggtggagtttgttcttgcaacttttttgttgtttatgtcttgagctagtttgggtgagt...
species | Glycine max |
transcript | GLYMA11G21490.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GTATGGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTCCTCATCAG GAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTAEST: gi|208283464|gb|GE088534.1|GE088534
genomic: GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAGgtttgtaatt ... taattaacagGAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTA
EST: GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAG GAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTAEST: gi|298194263|gb|HO040911.1|HO040911
genomic: GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAGgtttgtaatt ... taattaacagGAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTA
EST: TGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAG GAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTAEST: gi|57574660|gb|CX547635.1|CX547635
genomic: TGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAGgtttgtaatt ... taattaacagGAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTA
EST: TATGGGCATGAGTTC-ACAAATNNTCAGTTTCAA-TAA-TTCNTCATCAG GAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTEST: gi|208175374|gb|GD976769.1|GD976769
genomic: TATTGGCATGAGTTCAAC-AATTTTCAGTTTCAATTAATTTC-TCATCAGgtttgtaatt ... taattaacagGAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTT
EST: GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAG GAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTAEST: gi|20498067|gb|BQ272997.1|BQ272997
genomic: GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAGgtttgtaatt ... taattaacagGAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTA
EST: GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAG GAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTA
genomic: GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAGgtttgtaatt ... taattaacagGAGGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCACAAGCACATTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATTGGCATGAGTTCAACAATTTTCAGTTTCAATTAATTTCTCATCAGgtttgtaattatctccctgccctttcccataccatcttgttggtggagtttgttcttgcaacttttttgttgtttatgtcttgagctagtttgggtgagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccctgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctttccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttggtgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttgggtg