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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAACATGGGGATAAGCCCTCCAAACATGGGACTCCGAAGGAACATTAGTACTAGCCCTGTACCTTTGCCCGAAACGTTTCTTGACTCGTCCTGTTTCACTgtaggtttttttaccctctcttgtgtatgtaatgttcttctaatgattagtcttgtccaaatattgatctgaatttttttgcactgcag

Basic information

species Glycine max
transcript GLYMA11G12450.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13787686|gb|BG650278.1|BG650278
EST:     CTAGCCCTGTACCTTTGCCCGAAACGTTTCTTGACTCGTCCTGTTTCACT                         CAAATTCTACCCTCCTCAAATTGGGAAGGTGGTGATTTCCAAAGCCTTTAC
genomic: CTAGCCCTGTACCTTTGCCCGAAACGTTTCTTGACTCGTCCTGTTTCACTgtaggttttt ... tgcactgcagCAAATTCTACCCTCCTCAAATTGGGAAGGTGGTGATTTCCAAAGCCTTTAC
EST: gi|13125072|gb|BG315615.1|BG315615
EST:     CTAGCCCTGTACCTTTGCCCGAAACGTTTCTTGACTCGTCCTGTTTCACT                         CAAATTCTACCCTCCTCAAATTGGGAAGGTGGTGATTTCCAAAGCCTTTAC
genomic: CTAGCCCTGTACCTTTGCCCGAAACGTTTCTTGACTCGTCCTGTTTCACTgtaggttttt ... tgcactgcagCAAATTCTACCCTCCTCAAATTGGGAAGGTGGTGATTTCCAAAGCCTTTAC