1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AGTGAGCTTCATGGATTAGCTGCTTTGCAGTGGTCGATTTGTCAAGACTCCCTCAGTAGgtatgttcagaaacttcatgacatatctgaacttctcaaggaaactaccagattgtgttctacatagaattgatgacacatcctaatattaaatatgcat...
species | Glycine max |
transcript | GLYMA11G12160.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CATGGATTAGCTGCTTTGCAGTGGTCGATTTGTCAAGACTCCCTCAGTAG GTCCAATGAGGCTCGAGGTATGTATGAGAAGCTTAAATCTCATCCAAATCCEST: gi|9259465|gb|BE347612.1|BE347612
genomic: CATGGATTAGCTGCTTTGCAGTGGTCGATTTGTCAAGACTCCCTCAGTAGgtatgttcag ... tgattgacagGTCCAATGAGGCTCGAGGTATGTATGAGAAGCTTAAATCTCATCCAAATCC
EST: CATGGATTAGCTGCTTTGCAGTGGTCGATTTGTCAAGACTCCCTCAGTAG GTCCAATGAGGCTCGAGGTATGTATGAGAAGCTTAAATCTCATCCAAATCCEST: gi|20448839|gb|BQ252963.1|BQ252963
genomic: CATGGATTAGCTGCTTTGCAGTGGTCGATTTGTCAAGACTCCCTCAGTAGgtatgttcag ... tgattgacagGTCCAATGAGGCTCGAGGTATGTATGAGAAGCTTAAATCTCATCCAAATCC
EST: CATGGATTAGCTGCTTTGCAGTGGTCGATTTGTCAAGACTCCCTCAGTAG GTCCAATGAGGCTCGAGGTATGTATGAGAAGCTTAAATCTCATCCAAATCC
genomic: CATGGATTAGCTGCTTTGCAGTGGTCGATTTGTCAAGACTCCCTCAGTAGgtatgttcag ... tgattgacagGTCCAATGAGGCTCGAGGTATGTATGAGAAGCTTAAATCTCATCCAAATCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTGAGCTTCATGGATTAGCTGCTTTGCAGTGGTCGATTTGTCAAGACTCCCTCAGTAGgtatgttcagaaacttcatgacatatctgaacttctcaaggaaactaccagattgtgttctacatagaattgatgacacatcctaatattaaatatgcat
- - - - CATGGA
- - - - - - - - AGCTGC
- - - - - - - - - GCTGCT