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CTACCAGGAAGCAATTGAGGACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAGgtttgtcgcacatggcttctgttctgcatatattcttttcattaacttagttgtagttaattaacctgtgctgacaagagattatatagagtttgttatt...
species | Glycine max |
transcript | GLYMA11G11960.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAG GTAGAAACAATTGATGACTATGATGAATATTGTCACTATGTGGCGGGACTTEST: gi|208160470|gb|GD958766.1|GD958766
genomic: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAGgtttgtcgca ... ttttttccagGTAGAAACAATTGATGACTATGATGAATATTGTCACTATGTGGCGGGACTT
EST: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAG GTAGAAACAATTGATGACTATGATGAATATTGTCACTATEST: gi|209722769|gb|BW682867.1|BW682867
genomic: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAGgtttgtcgca ... ttttttccagGTAGAAACAATTGATGACTATGATGAATATTGTCACTAT
EST: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAG GTAGAAACAATTGATGACTATGATGAATATTGTCACTATGTGGEST: gi|20813646|gb|BQ298124.1|BQ298124
genomic: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAGgtttgtcgca ... ttttttccagGTAGAAACAATTGATGACTATGATGAATATTGTCACTATGTGG
EST: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAG GTAGAAACAATTGATGACTATGATGAATATTGTCACTATGTGGCGGGACTTEST: gi|209725283|gb|BW672760.1|BW672760
genomic: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAGgtttgtcgca ... ttttttccagGTAGAAACAATTGATGACTATGATGAATATTGTCACTATGTGGCGGGACTT
EST: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAG GTAGAAACAATTGATGACTATGATGAATATTGTCACTATGTGGCG
genomic: ACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAGgtttgtcgca ... ttttttccagGTAGAAACAATTGATGACTATGATGAATATTGTCACTATGTGGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTACCAGGAAGCAATTGAGGACATTACCAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAGgtttgtcgcacatggcttctgttctgcatatattcttttcattaacttagttgtagttaattaacctgtgctgacaagagattatatagagtttgttatt
- - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG