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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCTTTTCTTGCATTAGCTAAAGAACAATCTCGTGGAAGTGATATAAAAGCTCAAGCATCAATCTGTGCTCAATACAAGATAACAGTCACTCTTCTTCAGgtactattactatgcttcaatttctaatggaatgaatag

Basic information

species Glycine max
transcript GLYMA11G06140.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G06140.1 (Glycine max), 5'ss of exon 5
lower sequence: AT3G50590.1 (Arabidopsis thaliana), 5'ss of exon 25
ATCTTTTCTTGCATTAGCTAAAGAACAATCTCGTGGAAGTGATATAAAAGCTCAAGCATCAATCTGTGCTCAATACAAGATAACAGTCACTCTTCTTCAGgtactattactatgcttcaatttctaatggaatgaatag----------------------------------------------------------------
| | ||  | ||  | ||||| || ||||| |||||    ||||| |||||||||||  ||||||||||||| ||||||||| | || ||||| |||| ||||  | ||     | || || ||   || ||||| |                                                                  
AGCATTCTTGGCTCTGGCTAAGGATCAATCGCGTGGTGCAGATATCAAAGCTCAAGCCACAATCTGTGCTCAGTACAAGATAGCTGTAACTCTCCTTCGGgta--actaactctcgtcgatctcccctgtaatgagtttagattctgctcaaacgatgagaccatcttatcaatgctttttttctcctctctcccatttgcag