1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GAAAATTGGAGAAAGGTGCTGTTCTAAAGGCTATATGTTCTGGGTTTGAGGAAACTACTGAACCAACTGTTTGCTTGAGCAGTGgcaagtgtttactttttttttattcatacaaggaaaatatactttgtgacctgattctttctgactggcatactttatggggcag
species | Glycine max |
transcript | GLYMA11G00370.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATGTTCTGGGTTTGAGGAAACTACTGAACCAACTGTTTGCTTGAGCAGTG ATGTGGAGACAAATGAGTGCTTGACAAACAATGGTGGTTGCTGGCAGGATAEST: gi|208200101|gb|GD996030.1|GD996030
genomic: ATGTTCTGGGTTTGAGGAAACTACTGAACCAACTGTTTGCTTGAGCAGTGgcaagtgttt ... tatggggcagATGTGGAGACAAATGAGTGCTTGACAAACAATGGTGGTTGCTGGCAGGATA
EST: ATGTTCTGGGTTTGAGGAAACTACTGAACCAACTGTTTGCTTGAGCAGTG ATGTGGAGACAAATGAGTGCTTGACAEST: gi|193660365|gb|FK603877.1|FK603877
genomic: ATGTTCTGGGTTTGAGGAAACTACTGAACCAACTGTTTGCTTGAGCAGTGgcaagtgttt ... tatggggcagATGTGGAGACAAATGAGTGCTTGACA
EST: ATGTTCTGGGTTTGAGGAAACTACTGAACCAACTGTTTGCTTGAGCAGTG ATGTGGAGACAAATGAGTGCTTGACAAACAATGGTGGTTGCTGGCAGGATA
genomic: ATGTTCTGGGTTTGAGGAAACTACTGAACCAACTGTTTGCTTGAGCAGTGgcaagtgttt ... tatggggcagATGTGGAGACAAATGAGTGCTTGACAAACAATGGTGGTTGCTGGCAGGATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAATTGGAGAAAGGTGCTGTTCTAAAGGCTATATGTTCTGGGTTTGAGGAAACTACTGAACCAACTGTTTGCTTGAGCAGTGgcaagtgtttactttttttttattcatacaaggaaaatatactttgtgacctgattctttctgactggcatactttatggggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG