Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAATACATAATGAAACAAAGCATGCCTAAAGATGGAAAATTACTTGCAATTGGACACTCCATGGGTGGTATCCTGCTTTACTCCATGCTATCACGGTTTGgtaagttttatagaaatgtaaatctaggacaagcagagcatcacctctttacatatactgacacatctgtattttcatctgcacaggcatgtataaaataaatatgtaagttatttacgtaatatttgttttaatttcatgtaag

Basic information

species Glycine max
transcript GLYMA10G41630.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G41630.1 (Glycine max), 5'ss of exon 5
lower sequence: AT1G15060.1 (Arabidopsis thaliana), 5'ss of exon 4
GAATACATAATGAAACAAAGCATGCCTAAAGATGGAAAATTACTTGCAATTGGACACTCCATGGGTGGTATCCTGCTTTACTCCATGCTATCACGGTTTGgtaagttttatagaaatgtaaatctaggacaagcagagcatcacctctttacatatactgacacatctgtattttcatctgcacaggcatgtataaaataaatatgtaagttatttacgtaatatttgttttaatttcatgtaag
|| ||  |||    |||||||| ||| || || || ||| || | |||||||| ||||||||||| |||||||| || ||  | ||||||||||| | |||||||||       | | |  ||||    ||| |||||  |||  | || |     |    ||  |||    | | || |    ||                                                           
GAGTATGTAAGAGCACAAAGCAAGCCCAAGGACGGCAAACTATTCGCAATTGGGCACTCCATGGGGGGTATCCTACTCTATGCAATGCTATCACGTTGTGgtaagtt-------agtattcatcttt--caaacagaggctcatatattaaggccgaaattcatttcttctctattattttgttag-----------------------------------------------------------