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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGAAGAGAGCACAACACAGGGTGCTGCTACAAAAGCTGTTGAGGCAGAGAATGATCTTCCAGAGCCACCTACAGTAACCGTGGTTAAACCTAAATACAGgttagtgcagccttctgcttttgtgccatttactaaggttattgttttacatattgaaagtgcctcataatttctgttgctcatatctgttgtactgcta...

Basic information

species Glycine max
transcript GLYMA10G37440.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9565119|gb|BE474628.1|BE474628
EST:     AATGATCTTCCAGAGCCACCTACAGTAACCGTGGTTAAACCTAAATACAG                         GCATGAATTCTACCAGAAACCTGATGAAATGGTTATTACCATATTTGCAAA
genomic: AATGATCTTCCAGAGCCACCTACAGTAACCGTGGTTAAACCTAAATACAGgttagtgcag ... gttgatgcagGCATGAATTCTACCAGAAACCTGATGAAATGGTTATTACCATATTTGCAAA
EST: gi|151404312|gb|EV274122.1|EV274122
EST:     AATGATCTTCCAGAGCCACCTACAGTAACCGTGGTTAAACCTAAATACAG                         GCATGAATTCTACCAGAAACCTGATGAAATGGTTATTACCATATTTGCAAA
genomic: AATGATCTTCCAGAGCCACCTACAGTAACCGTGGTTAAACCTAAATACAGgttagtgcag ... gttgatgcagGCATGAATTCTACCAGAAACCTGATGAAATGGTTATTACCATATTTGCAAA
EST: gi|13481891|gb|BG511234.1|BG511234
EST:     AATGATCTTCCAGAGCCACCTACAGTAACCGTGGTTAAACCTAAATACAG                         GCATGAATTCTACCAGAAACCTGATGAAATGGTTATTACCATATTTGCAAA
genomic: AATGATCTTCCAGAGCCACCTACAGTAACCGTGGTTAAACCTAAATACAGgttagtgcag ... gttgatgcagGCATGAATTCTACCAGAAACCTGATGAAATGGTTATTACCATATTTGCAAA