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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTTCCAATTATTTCATGTATTATTGATGGTACACTAGTCTATGATAAGGCTAGTCCTCCATTTGCTTCTTTCATATCTTCAGTCTGCCCAAAAATTGAGgtataattataattccctgcccgatattttgattttattcatatataattcaatttcatagctaaaatgtctcttgctttcttctttcagtttctatactgatttaatatagcaattattcagtttcagtatctacaaaggggttctctattattttcatttcttatgtgtataattttgcag

Basic information

species Glycine max
transcript GLYMA10G36600.2
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G36600.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv18s0157g00020.t01 (Vitis vinifera), 5'ss of exon 6
GCTTCCAATTATTTCATGTATTATTGATGGTACACTAGTCTATGATAAGGCTAGTCCTCCATTTGCTTCTTTCATATCTTCAGTCTGCCCAAAAATTGAGgtataattataattccctgcccgatattttgattttattcatatataattcaatttcatagctaaaatgtctcttgctttcttctttcagtttctatactgatttaatatagcaattattcagtttcagtatctacaaaggggttctctattattttcatttcttatgtgtataattttgcag
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TCTTCCAATTATTTCGTGTATCATTGATGGTACACTGGTGTATGATAGGTGTACTCCTCCTTTTGCCTCTTTCATTTCCTTGGTCTGCCCAAGCAGCGAGgtatg-tcgtgctggcatgactga---acaaatttgagttgctctgctttcaaatatcttgctcatgctattttttctttcttgttaaactgtagttttgggttttagaaacttatt-cccaattcttatgtg-attgatgagtggacaagagatcgtgatacatttttctaaa---ttgcag