1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGGTGCAGTGATGCTGCGCAGGAAATTTTACCCTGCTGCTACCAAGTTCTTGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAGgttagatgacttgtttgattgctaacaaagtaaattaaatttgaatttactttaaaaataggagaataatagcatctttctgccgttgagttctagtcaa...
species | Glycine max |
transcript | GLYMA10G35950.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAG GTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAAEST: gi|193595235|gb|FK553968.1|FK553968
genomic: TGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAGgttagatgac ... acatctatagGTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAA
EST: CGGATCTTGCCCAG GTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAAEST: gi|6847844|gb|AW350134.1|AW350134
genomic: CGGATCTTGCCCAGgttagatgac ... acatctatagGTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAA
EST: TGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAG GTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAAEST: gi|21994168|gb|BQ785696.1|BQ785696
genomic: TGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAGgttagatgac ... acatctatagGTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAA
EST: TGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAG GTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAA
genomic: TGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAGgttagatgac ... acatctatagGTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGCAGTGATGCTGCGCAGGAAATTTTACCCTGCTGCTACCAAGTTCTTGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAGgttagatgacttgtttgattgctaacaaagtaaattaaatttgaatttactttaaaaataggagaataatagcatctttctgccgttgagttctagtcaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA