1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TTGGGAGAACTAAAACTGGGAGAATTACTGGATTCACCTCCTCCTGGACTGGATGAAGCTATTGCGATCTCCAAGgcatgcattttatgtactgtgattaattatttcattgctaatttttcaagtaataatccctttttgctctcctaacaattaaaagcctcttgtcag
species | Glycine max |
transcript | GLYMA10G35320.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TACTGGATTCACCTCCTCCTGGACTGGATGAAGCTATTGCGATCTCCAAG GTTATACAATTTCTCGAATCACAGGAATATAGCATGTTTACTCGAATAGTAEST: gi|7796764|gb|AW782158.1|AW782158
genomic: TACTGGATTCACCTCCTCCTGGACTGGATGAAGCTATTGCGATCTCCAAGgcatgcattt ... ctcttgtcagGTTATACAATTTCTCGAATCACAGGAATATAGCATGTTTACTCGAATAGTA
EST: TTGCGATCTCCAAG GTTATACAATTTCTCGAATCACAGGAATATAGCATGTTTACTCGAATAGTAEST: gi|7692581|gb|AW760684.1|AW760684
genomic: TTGCGATCTCCAAGgcatgcattt ... ctcttgtcagGTTATACAATTTCTCGAATCACAGGAATATAGCATGTTTACTCGAATAGTA
EST: TACTGGATTCACCTCCTCCTGGACTGGATGAAGCTATTGCGATCTCCAAT GTTATACAATTTCTCGAATCACAGGAATATAGCATGTTTACTCGAATAGTAEST: gi|9564725|gb|BE474234.1|BE474234
genomic: TACTGGATTCACCTCCTCCTGGACTGGATGAAGCTATTGCGATCTCCAAGgcatgcattt ... ctcttgtcagGTTATACAATTTCTCGAATCACAGGAATATAGCATGTTTACTCGAATAGTA
EST: TACTGGATTCACCTCCTCCTGGACTGGATGAAGCTATTGCGATCTCCAAG GTTATACAATTTCTCGAATCACAGGAATATAGCATGTTTACTCGAATAGTA
genomic: TACTGGATTCACCTCCTCCTGGACTGGATGAAGCTATTGCGATCTCCAAGgcatgcattt ... ctcttgtcagGTTATACAATTTCTCGAATCACAGGAATATAGCATGTTTACTCGAATAGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGGAGAACTAAAACTGGGAGAATTACTGGATTCACCTCCTCCTGGACTGGATGAAGCTATTGCGATCTCCAAGgcatgcattttatgtactgtgattaattatttcattgctaatttttcaagtaataatccctttttgctctcctaacaattaaaagcctcttgtcag
- - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC