1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCCATACACATATGTGCTTCCGTCTGTTGCACCACCGGCATACAATGCAGTGAATTACAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAGgttcttccatttccattgatttaatcttgtttgaagtttttcattttgtaagttgccaagtttcagacacacacacacacaaaggaaagattataaatta...
species | Glycine max |
transcript | GLYMA10G34220.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGAATTACAGACCAAATGGTGCTGCTAGAGGAAAGCTCCAGAACAGCAAG GAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGAEST: gi|22927860|gb|BU544999.1|BU544999
genomic: TGAATTACAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAGgttcttccat ... tctttgccagGAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGA
EST: TGAATTACAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAG GAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGAEST: gi|192308183|gb|FK001281.1|FK001281
genomic: TGAATTACAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAGgttcttccat ... tctttgccagGAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGA
EST: CAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAG GAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGAEST: gi|192303155|gb|FG997731.1|FG997731
genomic: CAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAGgttcttccat ... tctttgccagGAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGA
EST: CAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAG GAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGAEST: gi|208300205|gb|GE098892.1|GE098892
genomic: CAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAGgttcttccat ... tctttgccagGAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGA
EST: TGAATTACAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAG GAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGA
genomic: TGAATTACAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAGgttcttccat ... tctttgccagGAGGAGCGGAGTAACTCATTGACCATGGGTGTTGCAGATGAGCATATAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCATACACATATGTGCTTCCGTCTGTTGCACCACCGGCATACAATGCAGTGAATTACAGACCAAATGGTGCTGCTGGAGGAAAGCTCCAGAACAGCAAGgttcttccatttccattgatttaatcttgtttgaagtttttcattttgtaagttgccaagtttcagacacacacacacacaaaggaaagattataaatta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaggaaa