1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGGTCATGAAGTCAAGGAGGCATTAAGAGCTCAGATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAGgtaaatttccttttcacaatataaggtgctttattgttttgatataacatttaagaccattttggttgctattggaggtagaataggtgcatagttgcat...
species | Glycine max |
transcript | GLYMA10G34050.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CACTTACTAGTGGAG GCAGAGAAACACTTGCAGATTCGCCAGGATGCAGAGCGGAGATACATGGGCEST: gi|192305738|gb|FG995372.1|FG995372
genomic: CACTTACTAGTGGAGgtaaatttcc ... ggtattgcagGCAGAGAAACACTTGCAGATTCGCCAGGATGCAGAGCGGAGATACATGGGC
EST: CATTAAGAGCTCAGATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAG GCAGAGAAACACTTGCAGATTCGCCAGGATGCAGAGCGGAGATACATGGGCEST: gi|192305739|gb|FG995373.1|FG995373
genomic: CATTAAGAGCTCAGATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAGgtaaatttcc ... ggtattgcagGCAGAGAAACACTTGCAGATTCGCCAGGATGCAGAGCGGAGATACATGGGC
EST: ATTAAAGAGCTCAGATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAG GCAGAGAAACACTTGCAGATTCGCCAGGATGCAGAGCGGAGATACATGGGC
genomic: ATT-AAGAGCTCAGATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAGgtaaatttcc ... ggtattgcagGCAGAGAAACACTTGCAGATTCGCCAGGATGCAGAGCGGAGATACATGGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGTCATGAAGTCAAGGAGGCATTAAGAGCTCAGATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAGgtaaatttccttttcacaatataaggtgctttattgttttgatataacatttaagaccattttggttgctattggaggtagaataggtgcatagttgcat
- - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG