1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AACATACATTCCTAGTCCTCGATGGCAAGGTCCTTCAAGTTATGCGCCCTTAATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAGTgtaagctcatccattatttttagaggtcataaacaacacccagaagatagttttattctgtgttgtggctgattctaaggcacacgatagcaggattatt...
species | Glycine max |
transcript | GLYMA10G31370.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TAATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAGT GGTCAAATGGGGTCAATCTCTACTTCAGACAGTCCACAGCAAGCAATGAGAEST: gi|10843882|gb|BF067236.1|BF067236
genomic: TAATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAGTgtaagctcat ... tcttttgcagGGTCAAATGGGGTCAATCTCTACTTCAGACAGTCCACAGCAAGCAATGAGA
EST: TAATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAGT GGTCAAATGGGGTCAATCTCTACTTCAGACAGTCCACAGCAAGCAATGAGAEST: gi|13125739|gb|BG316309.1|BG316309
genomic: TAATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAGTgtaagctcat ... tcttttgcagGGTCAAATGGGGTCAATCTCTACTTCAGACAGTCCACAGCAAGCAATGAGA
EST: TAATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAGT GGTCAAATGGGGTCAATCTCTACTTCAGACAGTCCACAGCAAGCAATGAGA
genomic: TAATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAGTgtaagctcat ... tcttttgcagGGTCAAATGGGGTCAATCTCTACTTCAGACAGTCCACAGCAAGCAATGAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACATACATTCCTAGTCCTCGATGGCAAGGTCCTTCAAGTTATGCGCCCTTAATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAGTgtaagctcatccattatttttagaggtcataaacaacacccagaagatagttttattctgtgttgtggctgattctaaggcacacgatagcaggattatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG