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TCTCGAGTATGTTCCTGAAACAGTTAATCGGGTGATAAAACATTACAACAAGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgttgcccttcctgtctccagctctcatcgttgttcaggctgtaacaatattttttttatgttgcag
species | Glycine max |
transcript | GLYMA10G28530.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|151395928|gb|EV265805.1|EV265805
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: CTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|23726962|gb|BU761494.1|BU761494
genomic: CTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATEST: gi|7926516|gb|AW832542.1|AW832542
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATAT
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|9205358|gb|BE331582.1|BE331582
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: GAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|254344095|gb|GR851005.1|GR851005
genomic: GAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|16997089|gb|BM086461.1|BM086461
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|151411363|gb|EV281174.1|EV281174
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|13311272|gb|BG404905.1|BG404905
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|10843615|gb|BF066891.1|BF066891
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGEST: gi|6073128|gb|AW102515.1|AW102515
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
EST: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAG ATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
genomic: AGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgt ... tatgttgcagATCTTTAGGGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTCGAGTATGTTCCTGAAACAGTTAATCGGGTGATAAAACATTACAACAAGTTGAACCAAAGGATGCCACTGATATATGTGAAACTCTATACATACCAGgtatgactgttgcccttcctgtctccagctctcatcgttgttcaggctgtaacaatattttttttatgttgcag
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