1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TCTGAGAATGTTTTATGTCTTTTGCAGCTGCAACATTGGTGAGGGCGGTATTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtgaaaatactcattctaccttatattgtctgtcctaaacctctttgtgtcctgttgtcatggaatgtgaaatttttttaagaggttgtttca...
species | Glycine max |
transcript | GLYMA10G06590.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAG AEST: gi|207829407|gb|GD804025.1|GD804025
genomic: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtg ... atttatgcag-
EST: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAG AEST: gi|254329853|gb|GR839406.1|GR839406
genomic: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtg ... atttatgcag-
EST: TTGCACTTGCTGAGGCTGTACATGGTTCAGCA-CTGATATTGCTGGAAAG AATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGCEST: gi|33390519|gb|CA853714.1|CA853714
genomic: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtg ... atttatgcagAATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGC
EST: GCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAG AATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGCEST: gi|192329562|gb|FK022226.1|FK022226
genomic: GCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtg ... atttatgcagAATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGC
EST: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAG AATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGCEST: gi|192329563|gb|FK022227.1|FK022227
genomic: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtg ... atttatgcagAATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGC
EST: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAG AATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGCEST: gi|209700403|gb|BW664416.1|BW664416
genomic: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtg ... atttatgcagAATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGC
EST: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAG AATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGC
genomic: TTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtg ... atttatgcagAATTTGGCTAATCCAACTGCTTTACTGCTGAGTGGTGTTACAATGTTGCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTGAGAATGTTTTATGTCTTTTGCAGCTGCAACATTGGTGAGGGCGGTATTGCACTTGCTGAGGCTGTACATGGTTCAGCACCTGATATTGCTGGAAAGgtgagctgtgaaaatactcattctaccttatattgtctgtcctaaacctctttgtgtcctgttgtcatggaatgtgaaatttttttaagaggttgtttca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA