1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAATTTCAATGTTGGTGCTACGGTTGATTTGGATGTCCCACGTAGCTTTTGGAATCGCTTGGCTGGGAAGTATGGGAACATTTTCTATTGGAAAGAAAAGgtagtctcttgcttctcagtgtagctatttttaattagcctagttaacggtttaacttaacaccaaatgatacag
species | Glycine max |
transcript | GLYMA10G06430.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGGAAAGAAAAG GGGGAAGATTACATCTATTGAAGCAGCAGTTATGGCAATTTCTAGTTGCTTEST: gi|151409822|gb|EV279630.1|EV279630
genomic: TGGAAAGAAAAGgtagtctctt ... aatgatacagGGGGAAGA-TGCATCTATTGAAGCAGCAGTTATGGCAATTTCTAGTTGCTT
EST: GGAATCGCTTGGCTGGGAAGTATGGGAACATTTTCTATTGGAAAGAAAAG GGGGAAGATGCATCTATTGAAGCAGCAGTTATGGCAATTTCTAGTTGCTTGEST: gi|151402284|gb|EV272097.1|EV272097
genomic: GGAATCGCTTGGCTGGGAAGTATGGGAACATTTTCTATTGGAAAGAAAAGgtagtctctt ... aatgatacagGGGGAAGATGCATCTATTGAAGCAGCAGTTATGGCAATTTCTAGTTGCTTG
EST: GGAATCGCTTGGCTGGGAAGTATGGGAACATTTTCTATTGGAAAGAAA-G GGGGAAGATGCATCTATTGAAGCAGCAGTTATGGCAATTTCTAGTTGCTTG
genomic: GGAATCGCTTGGCTGGGAAGTATGGGAACATTTTCTATTGGAAAGAAAAGgtagtctctt ... aatgatacagGGGGAAGATGCATCTATTGAAGCAGCAGTTATGGCAATTTCTAGTTGCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATTTCAATGTTGGTGCTACGGTTGATTTGGATGTCCCACGTAGCTTTTGGAATCGCTTGGCTGGGAAGTATGGGAACATTTTCTATTGGAAAGAAAAGgtagtctcttgcttctcagtgtagctatttttaattagcctagttaacggtttaacttaacaccaaatgatacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA