1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTACTTTCTACAGGGCTTGGCAGGATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGgtacaatttctgggtttgatacttattgctgagcagatttacatattataatttgtgaattttgcaaaaaagcaggttaaaaagtaattattttgaatta...
species | Glycine max |
transcript | GLYMA09G38640.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAG TTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCATEST: gi|207777604|gb|GD747537.1|GD747537
genomic: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCAT
EST: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAG TTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCATEST: gi|192297697|gb|FG992775.1|FG992775
genomic: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCAT
EST: GATTGTGCCTAATTTGATTTCTAGGA-GCATACAAATAGTGCTGCTACAG TTCTTTATGCTTTCTTTEST: gi|26045883|gb|CA783315.1|CA783315
genomic: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTT
EST: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAG GTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCCTEST: gi|151405478|gb|EV275292.1|EV275292
genomic: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGGAGATCAT
EST: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAG TTCTTTATGCTTTCTTTGGGTEST: gi|208288397|gb|GE088750.1|GE088750
genomic: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGT
EST: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAG TTCTTTATGCTT-CTTTGG-TTAAGGTTACTGTACATTGCATGG
genomic: GATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGgtacaatttc ... tcacttgcagTTCTTTATGCTTTCTTTGGGTTAAGGTTACTGTACATTGCATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACTTTCTACAGGGCTTGGCAGGATTGTGCCTAATTTGATTTCTAGGAAGCATACAAATAGTGCTGCTACAGgtacaatttctgggtttgatacttattgctgagcagatttacatattataatttgtgaattttgcaaaaaagcaggttaaaaagtaattattttgaatta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagtaa