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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGATGGGGTAGATATTACTGCTAATTCTCTTCATCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTGgtaactgccgcattgtactattaaaaagaaaacaatgcttatatgttacattaaatagataggctgttctgaatattgaattcaaactcactgagcagga...

Basic information

species Glycine max
transcript GLYMA09G25070.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209720878|gb|BW662604.1|BW662604
EST:     TCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTG                         GACTACCAGGTGTAGTTAAGAAGTTGCTGAGTTATGTAGTTAAAAATGTTC
genomic: TCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTGgtaactgccg ... gtttatgcagGACTACCAGGTGTAGTTAAGAAGTTGCTGAGTTATGTAGTTAAAAATGTTC
EST: gi|208036589|gb|GD834854.1|GD834854
EST:     TCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTG                         GACTACCAGGTGTAGTTAAGAAGTTGCTGAGTTATGTAGTTAAAAATGTTC
genomic: TCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTGgtaactgccg ... gtttatgcagGACTACCAGGTGTAGTTAAGAAGTTGCTGAGTTATGTAGTTAAAAATGTTC
EST: gi|208244708|gb|GE038917.1|GE038917
EST:     TCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTG                         GACTACCAGGTGTAGTTAAGAAGTTGCTGAGTTATGTAGTTAAAAATGTTC
genomic: TCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTGgtaactgccg ... gtttatgcagGACTACCAGGTGTAGTTAAGAAGTTGCTGAGTTATGTAGTTAAAAATGTTC
EST: gi|58022034|gb|CX708775.1|CX708775
EST:     TCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTG                         GACTACCAGGTGTAGTTAAGAAGTTGCTGAGTTATGTAGTTAAAAATGTTC
genomic: TCCAGGAGCCATTGCCACCAATATCCATCGTTACAATAGTGTATTGACTGgtaactgccg ... gtttatgcagGACTACCAGGTGTAGTTAAGAAGTTGCTGAGTTATGTAGTTAAAAATGTTC