1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAAGTTCTCAAATGCTAAATCTATTTCTTCATCCCAATATTTTGGAGATCAGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcctttcctttaataacttgctggaacatatagtgtgcgaatacatttttgtagatcttggatgttcaatcccctgtattatcaagtaaaccc...
species | Glycine max |
transcript | GLYMA08G36700.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCG GGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAACEST: gi|58017014|gb|CX703756.1|CX703756
genomic: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcc ... ttaatttcagGGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAAC
EST: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCG GGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAACEST: gi|298194738|gb|HO043210.1|HO043210
genomic: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcc ... ttaatttcagGGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAAC
EST: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCG GGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAACEST: gi|57575109|gb|CX548084.1|CX548084
genomic: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcc ... ttaatttcagGGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAAC
EST: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCG GGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAACEST: gi|22524808|gb|BU083619.1|BU083619
genomic: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcc ... ttaatttcagGGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAAC
EST: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCG GGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAACEST: gi|58015077|gb|CX701819.1|CX701819
genomic: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcc ... ttaatttcagGGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAAC
EST: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCG GGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAACEST: gi|31311653|gb|CD396856.1|CD396856
genomic: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcc ... ttaatttcagGGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAAC
EST: GAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCG GGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAACEST: gi|15813255|gb|BI785530.1|BI785530
genomic: GAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcc ... ttaatttcagGGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAAC
EST: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCG GGTTCAAGTGCCATCTCCAGTGCTG
genomic: AGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcc ... ttaatttcagGGTTCAAGTGCCATCTCCAGTGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGTTCTCAAATGCTAAATCTATTTCTTCATCCCAATATTTTGGAGATCAGAACAAGGCTGCAGATGTGGATTCTCAAGCTACATTGTCTAAGTTTTCGgtatgcatcctttcctttaataacttgctggaacatatagtgtgcgaatacatttttgtagatcttggatgttcaatcccctgtattatcaagtaaaccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT