1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AATTTTTACAGAGGAAGGTGATAGTCATCTTACTGCTGACATGTATATAAATATGGATGGAAACGCAGAAGTTGAATGGACTCCATCTTCGATTTTTCAGgtaatttggaaatctgatttttttttgtgtgtgtgaatatattctatagattttctgacttatctgcctcatattgttcttagagtgatattgaaattga...
species | Glycine max |
transcript | GLYMA08G23840.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATATGGATGGAAACGCAGAAGTTGAATGGACTCCATCTTCGATTTTTCAG GAGCTTTTTGTAAAAEST: gi|193654058|gb|FK596472.1|FK596472
genomic: ATATGGATGGAAACGCAGAAGTTGAATGGACTCCATCTTCGATTTTTCAGgtaatttgga ... tattgtccagGAGCTTTTTGTAAAA
EST: ATATGGATGGAAACGCAGAAGTTGAATGGACTCCATCTTCGATTTTTCAG GAGCTTTTTGTAAAAEST: gi|21888131|gb|BQ741344.1|BQ741344
genomic: ATATGGATGGAAACGCAGAAGTTGAATGGACTCCATCTTCGATTTTTCAGgtaatttgga ... tattgtccagGAGCTTTTTGTAAAA
EST: ATATGGATGGAAACGCAGAAGTTGAATGGACTCCATCTTCGATTTTTCAG GAGCTTTTTGTAAAACTGAATCGAATGGCCAATATAGCAGCAGATATGTTT
genomic: ATATGGATGGAAACGCAGAAGTTGAATGGACTCCATCTTCGATTTTTCAGgtaatttgga ... tattgtccagGAGCTTTTTGTAAAACTGAATCGAATGGCCAATATAGCAGCAGATATGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATTTTTACAGAGGAAGGTGATAGTCATCTTACTGCTGACATGTATATAAATATGGATGGAAACGCAGAAGTTGAATGGACTCCATCTTCGATTTTTCAGgtaatttggaaatctgatttttttttgtgtgtgtgaatatattctatagattttctgacttatctgcctcatattgttcttagagtgatattgaaattga
- - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT